WormBase Userguide
Home Genome Blast / Blat Batch Genes Batch Sequences Markers Genetic Maps Submit More Searches

User's Guide for WormBase


[ Index ] [ Summary ] [ Menu ] [ Submenu ] [ FAQ ]


An Overview of The WormBase Homepage



At this writing, Wormbase is very much a dynamic, ongoing project. A good consequence of this is that new features and options are added and old ones are removed at a noticeable rate. A draw back, however, is that documentation written for a given feature of the WormBase Web interface may be obsolete by the time you are reading this text.

Therefore, this documentation is based upon the main WormBase web site at Cold Spring Harbor Laboratories (http://wormbase.org). The Greek mirror (http://worm.imbb.forth.gr/), at this writing, has many of the same features as the main site but lags behind the main site in some respects; that is because the Greek mirror represents the last version of the WormBase web site that was stable enough to be ported by non-WormBase staff.


WormBase is updated every two weeks, with each release assigned a new version number (for example: WS10, ... WS51, ... WS97). Release notes can be accessed directly from the WormBase home page: see the help page for Release notes.


Select a class from the pull-down menu to "Search for", and then type key words in the box.
If you leave the search box blank, everything from the selected class will appear as the search result. For example: if you select class "Cell", and type nothing in search box, all C. elegans cells will appear in the search result.
For anything you are not sure of, try using * as the wild card insertion; it can be placed anywhere in the keyword. Example: if you type "ad*", all data that begin with "ad" will appear in the search result.

What can be typed into the "Quick Search" box?
The following objects can be entered in the search box, which is case sensitive and space sensitive. You can search for a certain class such as "Any Gene" or "Author", or search for "Anything", which will return related objects from all classes.

See more details on the explanation of Quick Search tool.


The WormBase menu includes five basic options on the top of the WormBase homepage. More advanced search tools can be found under the "More Searches" option.

To learn how to use these search tools, please read the User's Guide help pages for Basic Search Tools and Advanced Search Tools.

Sometimes a submenu will appear when you search for certain items such as genetic map, sequence report or cell lineage. The submenu usually is for different displays of information, for example, "Tree display" versus "Graphic display", etc. For more information, please read the help page for Sub Menu.


[ User Guide Home ] [ Page Top ]


Page maintained by Wen J. Chen Documentation by Wen J. Chen
Send comments or questions to WormBase Graphics by Wen J. Chen