Individual sample values for gene expression in LSK CD27- (stemcell like), LSK CD27+ (MPP-like), and DN subsets; Expression relative to GAPD
Gene |
10LSK- |
26LSK- |
15LSK- |
9LSK+ |
25LSK+ |
16LSK+ |
15DN1 |
24DN1 |
DN1.MY |
15DN2 |
24DN2 |
DN2.MY |
15DN3a |
24DN3a |
DN3a.MY |
24DN3b |
15DN3b |
DN3b.MY |
15DN4 |
24DN4 |
DN4.MY |
1PreM |
2PreM |
33preM |
8ProB |
21ProB |
3ProB |
11ProT |
19ProT |
20ProT |
Bcl11a
|
-1.43 |
-1.34 |
-1.35 |
-1.49 |
-1.43 |
-1.51 |
-1.46 |
-1.35 |
-1.96 |
-2.12 |
-2 |
-2.66 |
-2.64 |
-2.44 |
-2.54 |
-2.72 |
-3.01 |
-3.08 |
-3.62 |
-3.55 |
-3.52 |
-1.96 |
-2.21 |
-2.54 |
-1.21 |
-1.35 |
-1.38 |
|
|
|
Bcl11b
|
-5.22 |
-4.52 |
-5.7 |
-3.82 |
-4.21 |
-4.37 |
-4.52 |
-3.96 |
-1.85 |
-1.54 |
-1.68 |
-1.54 |
-1.37 |
-1.48 |
-1.47 |
-1.8 |
-1.96 |
-1.8 |
-1.82 |
-1.85 |
-1.85 |
-4.96 |
-6.15 |
-5.7 |
-5.7 |
-6.1 |
-5.15 |
-1.37 |
-0.89 |
-0.82 |
cMyb
|
-0.89 |
-0.89 |
-0.96 |
-0.7 |
-0.8 |
-0.77 |
-0.41 |
-0.82 |
-0.74 |
-0.34 |
-0.57 |
-0.39 |
-0.36 |
-0.96 |
-0.23 |
-0.85 |
-0.55 |
-0.7 |
-0.96 |
-1.07 |
-1.11 |
-1.55 |
-1.34 |
-1.85 |
-0.59 |
-0.72 |
-0.85 |
|
|
|
Deltex1
|
-5.22 |
-4.52 |
-5.7 |
-5.52 |
-5.7 |
-6 |
-3.19 |
-4.17 |
-4 |
-4.3 |
-4.3 |
-3.15 |
-2.34 |
-2.43 |
-2.17 |
-2.26 |
-2.64 |
-2.68 |
-3.21 |
-2.43 |
-2.46 |
-3.92 |
-4.62 |
-5.4 |
-4 |
-4.8 |
-5.15 |
-1.27 |
-1.02 |
-1.09 |
Dtx3L
|
-4.48 |
-4.7 |
-4.23 |
-5.15 |
-3.89 |
-5.15 |
-4.15 |
-3.7 |
-4 |
-3.1 |
-3.92 |
-4 |
-2.92 |
-3 |
-3.51 |
-2.89 |
-4.7 |
-4 |
-4.7 |
-4.77 |
-4.12 |
-3.6 |
-4.27 |
-4.96 |
-3.64 |
-4.05 |
-4.19 |
|
|
|
Eva1
|
-3.35 |
-4.22 |
-3.02 |
-4.42 |
-3.77 |
-3.85 |
-3.14 |
-3.46 |
-4 |
-2.25 |
-2.41 |
-1.77 |
-1.24 |
-1.32 |
-1.38 |
-2 |
-2.15 |
-2.22 |
-2.96 |
-2.55 |
-2.49 |
-3.77 |
-3.89 |
-3.74 |
-2.51 |
-2.85 |
-2.92 |
|
|
|
Fkbp5
|
-2.1 |
-1.92 |
-2.11 |
-2.03 |
-1.96 |
-2 |
-1.85 |
-2 |
-2.02 |
-1.49 |
-1.96 |
-1.57 |
-1.09 |
-1.41 |
|
-1.39 |
-1.52 |
-1.54 |
-1.6 |
-1.66 |
-1.43 |
-2.21 |
-2.07 |
-2.36 |
-2.16 |
-2.27 |
-2.11 |
|
|
|
GATA3
|
-2.96 |
-3.42 |
-2.68 |
-2.64 |
-2.33 |
-2.34 |
-1.82 |
-2.08 |
-1.77 |
-1.42 |
-1.6 |
-1.72 |
-1.32 |
-1.57 |
-1.38 |
-1.68 |
-1.74 |
-1.77 |
-1.72 |
-2 |
-1.7 |
-3.32 |
-3.29 |
-3.51 |
-3.19 |
-4.21 |
-3.08 |
|
|
|
HEB-alt
|
-2.96 |
-2.42 |
-2.72 |
-3.17 |
-2.96 |
-2.8 |
-2.96 |
-5.22 |
-4 |
-1.27 |
-1.32 |
-1.29 |
-1.07 |
-1.14 |
-1.22 |
-1.62 |
-1.77 |
-1.74 |
-2.33 |
-2.28 |
-2.15 |
-2.82 |
-3.64 |
-3.32 |
-1.89 |
-1.96 |
-2.47 |
|
|
|
PU.1
|
-1.92 |
-1.82 |
-1.66 |
-1.38 |
-1.39 |
-1.33 |
-1.31 |
-1.57 |
-1.54 |
-1.85 |
-1.8 |
-2.26 |
-3.24 |
-3.01 |
-3.17 |
-4 |
-4.12 |
-4.7 |
-4.12 |
-5.52 |
-4.04 |
-0.59 |
-0.89 |
-0.89 |
-1.66 |
-2.02 |
-1.68 |
|
|
|
Scl
|
-2.41 |
-2.35 |
-2.26 |
-1.92 |
-1.92 |
-1.82 |
-2 |
-2.06 |
-2.31 |
-2.48 |
-2.57 |
-4 |
-4.7 |
-4.3 |
-5 |
-4.52 |
-5.52 |
-5 |
-6.15 |
-5.52 |
-6 |
-3.51 |
-3.46 |
-3.41 |
-3.44 |
-3.57 |
-2.82 |
-4 |
-3.7 |
-4 |
Zfp109
|
-2.77 |
-2.77 |
-2.74 |
-2.27 |
-2.14 |
-2.15 |
-1.89 |
-2.17 |
-4 |
-2.03 |
-2.13 |
-2.77 |
-1.96 |
-2.11 |
-2.17 |
-2.34 |
-2.48 |
-2.59 |
-2.25 |
-2.82 |
-2.72 |
-3.4 |
-3.07 |
-3.48 |
-2.8 |
-3 |
-2.96 |
|
|
|
Zfp30
|
-4.2 |
-4.3 |
-3.77 |
-3.14 |
-2.96 |
-3.11 |
-3.42 |
-3.6 |
|
-3.59 |
-4.1 |
|
-3.46 |
-3.82 |
|
-4.52 |
-4.74 |
|
-4.54 |
-5.52 |
|
-5.05 |
-6.3 |
-5 |
-3.92 |
-4.06 |
-3.92 |
-3.4 |
-3.52 |
-3.52 |
Ddx19b
|
-2.2 |
-1.89 |
-2.16 |
-1.96 |
-2.03 |
-2.06 |
-2.22 |
-2.33 |
-2.74 |
-1.92 |
-2.21 |
-2.2 |
-1.89 |
-1.96 |
-1.89 |
-2.11 |
-2.25 |
-2.26 |
-2.2 |
-2.59 |
-2.15 |
-2.82 |
-2.64 |
-3 |
-2.27 |
-2.23 |
-2.28 |
-1.7 |
-1.77 |
-1.74 |
Helz
|
-2.37 |
-1.96 |
-2.22 |
-2.04 |
-2 |
-1.96 |
-1.72 |
-1.82 |
-1.62 |
-1.68 |
-1.74 |
-1.85 |
-1.48 |
-1.52 |
-1.47 |
-1.85 |
-1.96 |
-1.74 |
-1.82 |
-2.12 |
-1.89 |
-2.48 |
-2.51 |
-2.52 |
-1.96 |
-2.21 |
-2.39 |
-1.77 |
-1.66 |
-1.66 |
Tmem131
|
-1.66 |
-1.32 |
-1.43 |
-1.36 |
-1.41 |
-1.3 |
-0.96 |
-1.07 |
|
|
-0.96 |
|
-0.28 |
-0.34 |
-0.31 |
-0.85 |
-1.01 |
|
-1.07 |
-1.15 |
|
-1.32 |
-1.41 |
-1.24 |
-1.29 |
-1.44 |
-1.54 |
|
|
|
|
Averages of log transformed values
Gene |
.LSK- |
.LSK+ |
.DN1. |
.DN2. |
.DN3a. |
.DN3b. |
.DN4. |
.PreM. |
.ProB. |
Bcl11a
|
-1.37 |
-1.48 |
-1.59 |
-2.26 |
-2.54 |
-2.96 |
-3.57 |
-2.24 |
-1.31 |
Bcl11b
|
-5.15 |
-4.13 |
-3.47 |
-1.59 |
-1.44 |
-1.85 |
-1.85 |
-5.7 |
-5.7 |
cMyb
|
-0.92 |
-0.74 |
-0.66 |
-0.43 |
-0.52 |
-0.7 |
-1.05 |
-1.59 |
-0.72 |
Deltex1
|
-5.15 |
-5.7 |
-3.74 |
-4 |
-2.31 |
-2.52 |
-2.7 |
-4.64 |
-4.66 |
Dtx3L
|
-4.48 |
-4.72 |
-3.96 |
-3.7 |
-3.14 |
-3.85 |
-4.54 |
-4.28 |
-3.96 |
Eva1
|
-3.54 |
-4.02 |
-3.49 |
-2.14 |
-1.31 |
-2.12 |
-2.66 |
-3.8 |
-2.77 |
Fkbp5
|
-2.05 |
-2 |
-1.96 |
-1.68 |
-1.25 |
-1.48 |
-1.57 |
-2.21 |
-2.18 |
GATA3
|
-3.02 |
-2.44 |
-1.89 |
-1.59 |
-1.42 |
-1.72 |
-1.8 |
-3.38 |
-3.49 |
HEB-alt
|
-2.7 |
-2.96 |
-4.05 |
-1.29 |
-1.14 |
-1.7 |
-2.25 |
-3.26 |
-2.1 |
PU.1
|
-1.8 |
-1.36 |
-1.47 |
-1.96 |
-3.14 |
-4.22 |
-4.55 |
-0.77 |
-1.8 |
Scl
|
-2.34 |
-1.89 |
-2.12 |
-2.96 |
-4.52 |
-5 |
-6 |
-3.46 |
-3.28 |
Zfp109
|
-2.77 |
-2.18 |
-2.68 |
-2.31 |
-2.09 |
-2.47 |
-2.6 |
-3.31 |
-2.92 |
Zfp30
|
-4.1 |
-3.07 |
-3.51 |
-4 |
-3.64 |
-4.52 |
-5.05 |
-5.4 |
-3.96 |
Ddx19b
|
-2.09 |
-2.02 |
-2.43 |
-2.11 |
-1.89 |
-2.21 |
-2.32 |
-2.82 |
-2.26 |
Helz
|
-2.18 |
-2 |
-1.72 |
-1.77 |
-1.49 |
-1.85 |
-1.96 |
-2.51 |
-2.18 |
Tmem13
|
-1.47 |
-1.36 |
-1 |
-0.96 |
-0.31 |
-0.92 |
-1.11 |
-1.33 |
-1.43 |
|