Peer-reviewed Publications

 

 

 
Supatto W, McMahon A, Fraser SE, and Stathopoulos A: Quantitative imaging of collective cell migration during Drosophila gastrulation: multiphoton microscopy and computational analysis.
Nature Protocols, 4, 1397-1412 (2009).
Pubmed | Nature Publishing Group
 
         

 

 

 

 

 

 
McMahon A*, Supatto W*, Fraser SE, and Stathopoulos A: Dynamic analyses of Drosophila gastrulation provide insights into collective cell migration.
* equal contribution
Science, 322(5907), 1546-1550 (2008).
Pubmed | Google Scholar | Science website
Selected for Faculty of 1000 Biology:
"Complex dance of embryo cells filmed in new detail": New Scientist (2008) link
"First look at how groups of cells coordinate their movements": ScienceDaily (2008) link
Drosophila Image Award (2009)
 
         

 

 

 

 

 

 
Supatto W, Fraser SE, and Vermot J: An all-optical approach for probing microscopic flows in living embryos.
Biophysical Journal, 95:L29-L31, (2008).
Pubmed | Google Scholar | Scopus | Cell Press | pdf
 
"Going with the flow": News in Analytical Chemistry (2008) full text
"4D-particle tracking": Show case of Imaris (Bitplane AG, Switzerland)
         

 

 

 

 

 

 
Desprat N, Supatto W, Pouille PA, Beaurepaire E, and Farge E: Tissue deformation modulates Twist expression to determine anterior midgut differentiation in Drosophila embryos.
Developmental Cell, 15, 470-477 (2008).
Pubmed | Google Scholar | Scopus | Cell Press
 
Selected for Faculty of 1000 Biology:
"Giving a Twist to Twist": Editor's Choice in Science, 322(5902), 653 (2008). full text
"Cell biology: Stretching the imagination": News Feature in Nature, 456(7223), 696-699 (2008). full text
         

 

 

 

 

 

 
Debarre D, Supatto W, Pena AM, Fabre A, Tordjmann T, Combettes L, Schanne-Klein MC, and Beaurepaire E: Imaging lipid bodies in cells and tissues using third-harmonic generation microscopy.
Nature Methods, 3, 47-53 (2006).
Pubmed | Google Scholar | Scopus | Nature Publishing Group | pdf
 
Selected as cover page article.
"Great Balls of Fat": News Focus in Science, 311(5765), 1232-1234 (2006) full text
         

 

 

 

 

 

 
Debarre D, Pena AM, Supatto W, Boulesteix T, Strupler M, Sauviat MP, Martin JL, Schanne-Klein MC, and Beaurepaire E: Second- and third-harmonic generation microscopies for the structural imaging of intact tissues.
M/S - Medecine Sciences, 22(10), 845-852 (2006).
Pubmed | Google Scholar | pdf
         

 

 

 

 

 

 
Supatto W, Debarre D, Moulia B, Brouzes E, Martin JL, Farge E, and Beaurepaire E: in vivo modulation of morphogenetic movements in Drosophila embryos with femtosecond laser pulses.
PNAS, 102(4), 1047-1052 (2005).
Pubmed | Google Scholar | Scopus | PNAS website | pdf
 
"Making the kindest cut": Research Higlights in Nature Methods, 2, 155 (2005). full text | pdf
"Lasers used to see if function follows form", Biophotonics International 12(3), 51-2 (2005).
"A novel approach in developmental biology", INSERM actualites 189 (2005). full text
         

 

 

 

 

 

 
Debarre D, Supatto W, and Beaurepaire E: Structure sensitivity in third-harmonic generation microscopy.
Optics Letters, 30(16), 2134-2136 (2005).
Pubmed | Google Scholar | Scopus | Optical Society of America | pdf
         

 

 

 

 

 

 
Supatto W, Debarre D, Farge E, and Beaurepaire E: Femtosecond pulse-induced microprocessing of live Drosophila embryos.
Medical Laser Application, 20(3), 207-216 (2005).
Google Scholar | Scopus | ScienceDirect | pdf
         

 

 

 

 

 

 
Debarre D, Supatto W, Farge E, Moulia B, Schanne-Klein MC, and Beaurepaire E: Velocimetric third harmonic generation microscopy: micrometer-scale quantification of morphogenetic movements in unstained embryos.
Optics Letters, 29(24), 2881-2883 (2004).
Pubmed | Google Scholar | Scopus | Optical Society of America | pdf
         

 

 

 

 

 
Brouzes E, Supatto W, and Farge E: Is mechano-sensitive expression of twist involved in mesoderm formation?
Biology of the Cell, 96(7), 471-477 (2004).
Pubmed | Google Scholar | Scopus | ScienceDirect

 

 
 
 

Conference & Seminar Presentations

 
  • The Rockefeller University - Microscopy Workshop (invited speaker, 2009, New York, USA).
  • Morphogenesis & Regenerative Medicine Symposium (invited speaker, 2009, Charlottesville, Virginia, USA).
  • Tissue Dynamics & Growth - European Science Foundation workshop (invited speaker, 2009, Barcelona, Spain).
  • Caltech Biological Network Modeling Center seminar series (invited seminar, 2009, Pasadena, California, USA).
  • Bitplane Advanced Imaging Centers - Annual Meeting (invited partner, 2009, San Francisco, California, USA).
  • UC Berkeley - Advanced Imaging Methods Workshop (invited speaker, 2009, Berkeley, California, USA).
  • SPIE International Symposium - Photonics West (invited speaker, 2009, San Jose, California, USA).
  • Caltech Computational Morphodynamics Meeting (invited seminar, 2009, Pasadena, California, USA)
  • Institut Curie (invited seminar, 2008, Paris, France).
  • Asilomar IEEE Conference - Advances in Bioimaging and Analysis (invited speaker, 2008, Pacific Groove, California, USA).
  • GEM4 Summer School on Cell and Molecular Mechanics in Biomedicine (invited speaker, 2008, Caltech, Pasadena, California, USA).
  • EMBL - European Molecular Biology Laboratory (invited seminar, 2008, Heidelberg, Germany).
  • Bitplane Advanced Imaging Centers - Annual Meeting (invited partner, 2008, Zurich, Switzerland).
  • Institut Pasteur (invited seminar, 2008, Paris, France).
  • Institut Jacques Monod (invited seminar, 2008, Paris, France).
  • International Biophysics Congress (poster presentation, 2008, Long Beach, California, USA).
  • UCSB Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining (poster presentation, 2008, Santa Barbara, California, USA).
  • Exciting Biologies 2007: Biology in Motion - Annual Meeting oganized by MGH/IPSEN/Cell Press - (oral presentation, 2007, Evian, France).
  • Bitplane Advanced Imaging Centers - Annual Meeting (invited partner, 2007, San Juan, Puerto Rico).
  • IUSTI - Ecole Polytechnique Universitaire de Marseille -Departement de Mécanique (invited seminar, 2006, Marseille, France).
  • UC Berkeley - Department of Cell and Molecular Biology - Isacoff Lab (interview, 2006, Berkeley, California, USA).
  • SPIE International Symposium - Photonics West (oral presentation, 2006, San Jose, California, USA).
  • Lawrence Livermore National Lab - Physical Biosciences Institute (invited seminar, 2005, Livermore, California, USA).
  • UC Berkeley - Bioengineering Department - Kumar Lab (interview, 2005, Berkeley, California, USA).
  • California Institute of Technology - Biological Imaging Center - Fraser Lab (interview, 2005, Pasadena, California, USA).
  • Orsay University - Soft Matter Department (invited seminar, 2005, Orsay, France).
  • Paris University - Matter and Complex Systems Lab (invited seminar, 2005, Paris, France).
  • CNRS School for Interdisciplinary Training Courses in Biology (invited speaker, 2005, Ile de Berder, France).
  • IMVIE2 International Symposium - Imaging for Medical and Life Sciences (oral presentation, 2005, Illkirch/Strasbourg, France).
  • Seminaires des doctorants en chimie de l'Ecole Normale Supérieure (invited seminar, 2005, Paris, France).
  • 2emes Journees Scientifiques et Medicales de l'Institut Curie (oral presentation, 2005, Paris, France).
  • Institut Jacques Monod (invited seminar, 2004, Paris, France).
  • French Society of Biomechanics, 29th Annual Meeting (oral presentation, 2004, Créteil, France).
  • Les Houches Summerschool on Optics and Biology (oral presentation, 2003, Les Houches, France).
  •  
     
     

    Conference Proceedings & Abstracts

     
    Supatto W, Fraser SE, Vermot J: Probing cilia-driven flow in living embryos using femtosecond laser ablation and fast imaging, Proc. SPIE - Laser Application in Micro-organisms and Biotechnology, 7203, 72030B (2009). Google Scholar | SPIE DL
    Supatto W, McMahon A, Fraser SE, Stathopoulos A: Quantitative imaging of the collective cell movements shaping an embryo, Record of the 42nd Asilomar IEEE Conference on Signals, Systems and Computers - Advances in Bioimaging and Analysis, 61-63 (2009). IEEE Xplore
    Stathopoulos A, McMahon A, Supatto W, and Fraser SE: A quantitative analysis of imaging data provides insights into the coordination of cell movements during Drosophila gastrulation, Developmental Biology, 319(2): 476 (2008). ScienceDirect
     
    Supatto W, Brouzes E, Perrimon N, Fraser SE: Statistical analysis of cell movements during Drosophila embryo morphogenesis, Biophysical Journal, 94: 3194 (2008). Biophysical Journal website
    Supatto W, Debarre D, Moulia B, Farge E, and Beaurepaire E: An all-optical approach to modulate and quantitatively analyse embryo morphogenetic movements by using ultrashort laser pulses, Proc. SPIE - Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues, 6088, 60881D (2006). Google Scholar | SPIE DL
     
    Debarre D, Supatto W, and Beaurepaire E: Structure sensitivity and sources of contrast in third-harmonic generation (THG) microscopy of cells and tissues, Proc. SPIE - Multiphoton Microscopy in the Biomedical Sciences, 6089, 60891H (2006). Google Scholar | SPIE DL
     
    Supatto W, Debarre D, Moulia B, Brouzes E, Martin JL, Schanne-Klein MC, Farge E, and Beaurepaire E: in vivo analysis of Drosophila embryo developmental dynamics by femtosecond pulse-induced ablation and multimodal nonlinear microscopy, Proc. SPIE - Multiphoton Microscopy in the Biomedical Sciences V, 5700, 256-264 (2005). Google Scholar | SPIE DL
     
    Supatto W, Brouzes E, Farge E, and Beaurepaire E: in vivo micro-dissection and live embryo imaging using two-photon microscopy to study Drosophila melanogaster early developement, Proc. SPIE - Femtosecond Laser Applications in Biology, 5463, 13-20 (2004). Google Scholar | SPIE DL
     
    Brouzes E, Supatto W, Beaurepaire E, Farge E: Mechanical induction of twist at early Drosophila embryo gastrulation, 29ème Congrès de la Société de Biomécanique, Arch. Physiol. Biochem., 112 Supplement, 4 (2004).
     
    Supatto W, Brouzes E, Beaurepaire E, Moulia B, Farge E: Kinematic analysis of morphogenetic movements involved in mechanically induced gene expression during Drosophila early development, 29ème Congrès de la Société de Biomécanique, Arch. Physiol. Biochem., 112 Supplement, 77 (2004).
     
     

     

     

    PhD Thesis

     
    Supatto W: Quantitative multiphoton imaging and femtosecond pulse-induced ablation to study mechano-sensitive gene expression during early Drosophila embryo development, Paris VII / Institut Curie / Ecole Polytechnique, PhD Thesis (2005). Full text in French