Everything you ever wanted to know about Neuroscience But were afraid to ask
Bi/CNS 163
Summary
How do we know the brain is the seat of cognitive processes?
What did the brain evolve for?
Biology in a Nutshell *
Molecular and Cellular Neuroscience
The Neuron
Neurotransmitters (NT)
The Action Potential
Ion channels
Back to the Action Potential (Hodgkin & Huxley) *
The Molecular and Cellular Basis of Memory
The Brain-Blood Barrier
Systems Neuroscience
Specificity in the brain
The Problem of the Neural Code *
The Retina
The Ear
The Brain is Crossed-Over
Sensory cortex
Motor Cortex
The Neuronal Basis of Consciousness *
The Hippocampus, Memory and Spatial Navigation
Developmental Neuroscience
Techniques to study the brain
How do we know the brain is the seat of cognitive processes?
- Lesions
- Correlation of neural activity with cognitive processes
- Modification of behavior through neural stimulation
What did the brain evolve for?
- Responding to the environment to increase reproductive success
- Brain as an accumulation of ad-hoc solutions: expect push towards behavioral perfection, but not lack of overlap, etc.
Biology in a Nutshell
Cells and membranes
Linear polymers.
DNA. Bases. Genes.
Complementarity as the basis of heredity.
Mutations.
RNA made out of DNA template.
Proteins made combining aminoacids in ribosomes out of RNA instructions.
Proteins as transcription factors, regulating which genes are expressed.
Molecular and Cellular Neuroscience
The Neuron
Cajal (~1900): brain is made of discrete elements (neurons) vs. continuous theory of Golgi
Dendrites
Soma
Axon
Synapses
Neurotransmitters (NT)
- Molecules
- Transmit information across neurons
- Released by pre-synaptic cell in quanta: synaptic vesicles
- Produce effect in post-synaptic cell by activating receptors
- Different receptors produce different effects, even for same NT
The Action Potential
- Electrical signal
- Transmits information from neuronal soma to synapses in axon terminals.
- Is all-or-none (digital and binary)
- Is a voltage across cell membrane
- Produced at the spike initiation zone through synaptic input integration
- Transmitted along membrane passively following cable equation and amplified actively along the way by voltage-activated ion channels
Ion channels
- Molecules that constitute selective pores in neuronal membrane
- Produce currents that change voltage across membrane.
- Currents are caused by moving ions: Na+, K+, Ca++, Cl-, …
- Can be voltage-gated or ligand-gated (or none)
Back to the Action Potential (Hodgkin & Huxley)
- Electrochemical potentials
- Na/K pump creates ionic gradient across membrane that causes hi Na+ in and hi K+ out
- Membrane at rest is polarized with inside negative
- Action potential starts with the opening of ion channels that allow Na+ to follow its electrochemical gradient
- Depolarization causes opening of K+ channels and inactivation of Na+ channels, which repolarize membrane
- Inactivation prevents ‘bouncing’ of action potential
The Molecular and Cellular Basis of Memory
- Hebbian learning: "When an axon of cell A is near enough to excite a cell B and repeatedly or persistently takes part in firing it, some growth process or metabolic change takes place in one or both cells such that A’s efficiency, as one of the cells firing B, is increased".
- Synaptic efficacy modulation
- LTP and LTD
- Hebbian mechanisms used for pattern completion in neural networks
The Brain-Blood Barrier
- Most elements in blood do not enter brain
- Specific carrier molecules
Systems Neuroscience
Specificity in the brain
‘Specific nerve energies’: different nerves signal different kind of stimuli (e.g. heat, cold, pain, touch)
The paradigm of stimulus-response (Hubel & Wiesel)
Different brain areas are responsible for different aspects of perception and behavior
Differences in specific molecules can account for differences across individuals (e.g. rhodopsin)
The Problem of the Neural Code
- Neurons communicate via action potentials
- Taking the point of view of the organism: reading a spike train
- Periphery: reconstructing the stimulus (Bialek et al.)
- Making a decision: single neurons emulate the ability of whole monkeys (Newsome et al.)
- Periodic synchronization causes oscillations in field potentials. EEG.
- Inhibition with self-negative feedback and a fixed time-constant can generate oscillatory synchronization (Laurent et al.)
- Disruption of oscillatory synchronization impairs olfactory discrimination in bees & changes downstream neurons' response properties.
The Retina
- Rods and cones
- The construction of an image
- Center-surround receptive fields
The Ear
- Timpanus
- Cochlea is frequency tuned
The Brain is Crossed-Over
Sensory cortex
Visual cortex
V1 and retinotopy
Simple cells and complex cells: hierarchy
MT
V4 and color
Color opponency
Somatosensory cortex and the homunculus
Auditory cortex
Auditory neuroethology: Intensity and Phase differences
Coincidence detection, delay lines
Olfaction
Multidimensional receptor space
Pattern recognition
Motor Cortex
The Neuronal Basis of Consciousness
Binocular rivalry and correlation of neuronal activity with perceptual reports (Logothetis et al.)
Perceptual ‘reality’ is a creation of the brain. Illusions. The blind spot.
Itzhak Fried and the comic illusion
Color constancy. Color as a mental creation which can be independent of wavelength
Split Brain (Sperry, Gazzaniga, Bogen).
The Hippocampus, Memory and Spatial Navigation
- HM
- Place cells (O’Keefe, McNaughton, Wilson et al.)
Developmental Neuroscience
Genetic background and cellular/chemical environmental influence. Transplantation experiments.
Neuronal activity is required for correct segregation into functional areas (Shatz et al.)
Cat with eyes shut does not develop normal visual cortex
Visual afferents can be made to project to auditory cortex and show properties of both visual cortex and auditory cortex (Sur et al.)
Pathfinding molecules
Gradients of guiding molecules
Learning as continuation of development
Techniques to study the brain
Psychophysics and behavior
Electrophysiology
fMRI and PET