Cell Type Specific Log10 QPCR Expression Values

SynonymCell TypeQPCR ExpressionNormalized ToData From
Gfi1BDN1-1.23bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
Gfi1BDN1-0.85bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
.
Gfi1BDN2-1.39bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
Gfi1BDN2-1.05bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
.
Gfi1BDN3a-2.21bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
Gfi1BDN3a-2.06bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
.
Gfi1BDN3b-2.49bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
Gfi1BDN3b-2.38bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
.
Gfi1BDN4-2.82bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)
Gfi1BDN4-2.07bActinImmature Thymocyte Gene Expression Data (David-Fung et al. 2006 Immunological Reviews)

Effect of Key Gene Perturbations

SynonymPerturbationQPCR ExpressionRelative ToData From
Gfi1BBM1.47ThymusGATA-3 Expression, Other Tissues (Taghon et al. 2007 Nat. Immunol)
Gfi1BMast1.43ThymusGATA-3 Expression, Other Tissues (Taghon et al. 2007 Nat. Immunol)
Gfi1BFthymus0.03ThymusGATA-3 Expression, Other Tissues (Taghon et al. 2007 Nat. Immunol)
.
Gfi1BLZ_DL0LZ,DLNotch-Delta interaction data (Taghon et al. 2007 Nat. Immunol)
Gfi1BLZ_noDL-0.88LZ,DLNotch-Delta interaction data (Taghon et al. 2007 Nat. Immunol)
.
Gfi1BLZ_DL0LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
Gfi1BG3_DL0.64LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
Gfi1BKRRm_DL0.84LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
Gfi1BLZ_noDL-0.88LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
Gfi1BG3_noDL 0.25LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
Gfi1BKRRm_noDL-0.27LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)

Evidence for Interactions

Upstream NodeInteraction TypeTarget NodeLiterature Evidence
DN2, DN3 Stage Negative RegulatorREPRESSESGfi1BDavid-Fung et al 2006 Immunol. Rev.
High-level GATA-3PROMOTESGfi1BTaghon, Yui, Rothenberg 2007 Nat. Immunol.
GATA-1 antagonized by PU.1 (net GATA-1)PROMOTESGfi1Bbubble= net GATA-1 activity; Huang,D.Y., Kuo, & Chang, Nucleic Acids Res. 2005 Sep 21;33(16):5331-42.
Notch.CSLPROMOTESGfi1BTaghon, Yui, Rothenberg 2007 Nat. Immunol.
Net E protein activityPROMOTESGfi1BXu, W. and Kee, B. L. Blood. 2007 May 15;109(10):4406-14; Ikawa, T.et al.: Murre J Exp Med. 2006 May 15;203(5):1329-42.
Gfi1BREPRESSESGfi1Doan, L. L.et al.: Grimes Nucleic Acids Res. 2004 May 6;32(8):2508-19; Xu, W. and Kee, B. L. Blood. 2007 May 15;109(10):4406-14
Gfi1BREPRESSESGATA-3Xu, W. and Kee, B. L. Blood. 2007 May 15;109(10):4406-14