Cell Type Specific Log10 QPCR Expression Values

SynonymCell TypeQPCR ExpressionNormalized ToData From
CebpaCD4-4.68bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaCD4_24--3.8bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaCD4_69--5.62bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaCD8-3.72bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaCD8_24--4.27bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaCD8_69--5.74bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDN1-1.66bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN1-1.55bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN1-2.55bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN1-1.96bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDN2-3.82bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN2-4.7bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDN2a-3.82bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN2a-4bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN2a-3.77bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN2a-4.57bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDN2b-3.74bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN2b-3.24bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDN3a-3.03bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3a-3.68bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3a-3.89bActinIntrathymic T Cell Precursors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3a-2.47bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3a-4.27bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3a-3.77bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDN3b-3.85bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3b-3.38bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDN3b-4.8bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDP-4.66bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaDP69--4.19bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaDP69--3.89bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
.
CebpaGDT-4.01bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)
CebpaGDT-4.85bActinIntrathymic T Cell Precursors vs. Myeloid Progenitors (Rothenberg, Moore, and Yui 2008, Nat. Rev. Immunology)

Effect of Key Gene Perturbations

SynonymPerturbationQPCR ExpressionRelative ToData From
C.EBPaBM1.19ThymusGATA-3 Expression, Other Tissues (Taghon et al. 2007 Nat. Immunol)
C.EBPaMast1.6ThymusGATA-3 Expression, Other Tissues (Taghon et al. 2007 Nat. Immunol)
C.EBPaFthymus0.48ThymusGATA-3 Expression, Other Tissues (Taghon et al. 2007 Nat. Immunol)
.
C.EBPaLZ_DL0LZ,DLNotch-Delta interaction data (Franco et al. 2006 PNAS)
C.EBPaLZ_noDL0.53LZ,DLNotch-Delta interaction data (Franco et al. 2006 PNAS)
.
C.EBPaLZ_DL0LZ,DLNotch-Delta interaction data (Taghon et al. 2007 Nat. Immunol)
C.EBPaLZ_noDL0.06LZ,DLNotch-Delta interaction data (Taghon et al. 2007 Nat. Immunol)
.
C.EBPaLZ_DL0LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
C.EBPaG3_DL-0.32LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
C.EBPaKRRm_DL-0.29LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
C.EBPaLZ_noDL0.06LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
C.EBPaG3_noDL -0.12LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
C.EBPaKRRm_noDL-0.02LZ,DLOver Expressed GATA-3 (Taghon et al. 2007 Nat. Immunol)
.
C.EBPaDL_LZ0DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPaDL_LZ0DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPaDL_LZ0DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPaDL_PU1-0.21DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPaDL_PU10.63DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPaDL_PU1-0.31DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPanoDL_LZ0.5DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPanoDL_LZ1.05DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPanoDL_LZ0.05DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPanoDL_PU10.3DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPanoDL_PU10.91DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)
C.EBPanoDL_PU10.01DL,LZPU.1-Notch signaling interaction data (Franco et al. 2006 PNAS)

Evidence for Interactions

Upstream NodeInteraction TypeTarget NodeLiterature Evidence
GATA-3REPRESSESC.EBPaTaghon, Yui, Rothenberg 2007 Nat. Immunol.
Notch.CSLREPRESSESC.EBPaweak early effect? Stronger indirect effect? (Franco et al. 2006 shows effect on purified Thy-1+ cells; not seen in crude fraction in Taghon et al 2007)
DN2, DN3 Stage Negative RegulatorREPRESSESC.EBPaRothenberg, Moore, Yui 2008 Nat Rev Immunol
C.EBPaPROMOTESM-CSF-RPetrovick, M.S.et al.: Tenen, Mol Cell Biol. 1998 Jul;18(7):3915-25
C.EBPaPROMOTESGM-CSF-RHohaus, S..et al.: Tenen, Mol Cell Biol. 1995 Oct;15(10):5830-45
C.EBPaPROMOTESOther Myeloid GenesFriedman,A.D. Oncogene. 2007 Oct 15;26(47):6816-28